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AAT Bioquest

XFD555 Tetrazine

Product key features

  • Ex/Em: 553/568 nm
  • Extinction coefficient: 155,000 cm-1M-1
  • Reactive Group: Tetrazine
  • Click Chemistry Conjugation: Provides rapid and copper-free labeling of TCO-modified biomolecules
  • Bright & Stable: Exhibits intense fluorescence with resilience to photobleaching and pH variations from 4 to 10
  • Hydrophilic: Minimizes aggregation, enhancing signal clarity for advanced imaging and live-cell studies

Product description

XFD555, manufactured by AAT Bioquest, is structurally identical to Alexa Fluor™ 555 (ThermoFisher). It is a bright orange-fluorescent dye with an excitation optimized for use with either the 488 nm line of the argon-ion laser or the 532 nm line of the frequency-doubled Nd:YAG laser. The high fluorescence quantum yield and high photostability of XFD555 allow for the detection of low-abundance biological structures with great sensitivity. XFD555 demonstrates good aqueous solubility and pH-insensitivity over a broad pH range (pH 4–10), ensuring stable fluorescence generation under varying experimental conditions. XFD555 dye molecules can be attached to proteins at high molar ratios without significant self-quenching, enabling brighter conjugates and more sensitive detection in imaging and flow cytometry.

XFD555 tetrazine is particularly useful for labeling TCO-modified biomolecules under copper-free conditions. It reacts with TCO-functionalized molecules, forming a stable conjugate via a dihydropyrazine moiety. This click reaction is favored over others due to its extremely fast kinetics and higher yields under mild reaction conditions, making it a popular choice for researchers.

Spectrum

Product family

NameExcitation (nm)Emission (nm)Extinction coefficient (cm -1 M -1)Quantum yieldCorrection Factor (260 nm)Correction Factor (280 nm)
XFD488 tetrazine *Same Structure to Alexa Fluor™ 488 tetrazine*499520710000.9210.300.11
XFD555 acid5535681550000.110.080.08
XFD555 alkyne5535681500000.110.080.08
XFD555 amine5535681550000.110.080.08
XFD555 azide5535681500000.110.080.08
XFD555 TCO5535681500000.110.080.08
XFD635 Tetrazine633647140,000---
XFD647 Tetrazine6506712390000.3310.000.03
XFD680 Tetrazine6817041840000.3610.000.05
XFD700 Tetrazine6967191920000.2510.000.07
XFD750 Tetrazine7527762400000.1210.000.04
XFD790 Tetrazine782805260,000-0.090.08
Show More (3)

References

View all 31 references: Citation Explorer
Crosslinking intermodular condensation in non-ribosomal peptide biosynthesis.
Authors: Heberlig, Graham W and La Clair, James J and Burkart, Michael D
Journal: Nature (2025): 261-269
Conjugation of Multiple Proteins Onto the Surface of PLGA/Lipid Hybrid Nanoparticles.
Authors: Hu, He and Zhang, Chenming
Journal: Journal of biomedical materials research. Part A (2025): e37807
Probing Peptidoglycan Synthesis in the Gut Commensal Akkermansia Muciniphila with Bioorthogonal Chemical Reporters.
Authors: Sminia, Tjerk J and Aalvink, Steven and de Jong, Hanna and Tempelaars, Marcel H and Zuilhof, Han and Abee, Tjakko and de Vos, Willem M and Tytgat, Hanne L P and Wennekes, Tom
Journal: Chembiochem : a European journal of chemical biology (2024): e202400037
Fluorescence labeling strategies for cell surface expression of TRPV1.
Authors: Mott, Taylor M and Wulffraat, Grace C and Eddins, Alex J and Mehl, Ryan A and Senning, Eric N
Journal: The Journal of general physiology (2024)
Fluorescence labeling strategies for the study of ion channel and receptor cell surface expression: A comprehensive toolkit for extracellular labeling of TRPV1.
Authors: Mott, Taylor M and Wulffraat, Grace C and Eddins, Alex J and Mehl, Ryan A and Senning, Eric N
Journal: bioRxiv : the preprint server for biology (2024)
Page updated on April 15, 2025

Ordering information

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Catalog Number1727
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Physical properties

Solvent

DMSO

Spectral properties

Correction Factor (260 nm)

0.08

Correction Factor (280 nm)

0.08

Extinction coefficient (cm -1 M -1)

150000

Excitation (nm)

553

Emission (nm)

568

Quantum yield

0.11

Storage, safety and handling

H-phraseH303, H313, H333
Hazard symbolXN
Intended useResearch Use Only (RUO)
R-phraseR20, R21, R22

Storage

Freeze (< -15 °C); Minimize light exposure
UNSPSC12171501
Schematic illustrating the strain‐promoted inverse‐electron‐demand Diels–Alder (iEDDA) reaction between a tetrazine–dye conjugate and a trans‐cyclooctene (TCO)–modified biomolecule. The tetrazine–dye selectively and rapidly reacts with the TCO moiety on the biomolecule to form a stable linkage, labeling the nucleic acid with the dye. This bioorthogonal “click chemistry” process is fast, selective, and well‐suited for biocompatible labeling applications.
Schematic illustrating the strain‐promoted inverse‐electron‐demand Diels–Alder (iEDDA) reaction between a tetrazine–dye conjugate and a trans‐cyclooctene (TCO)–modified biomolecule. The tetrazine–dye selectively and rapidly reacts with the TCO moiety on the biomolecule to form a stable linkage, labeling the nucleic acid with the dye. This bioorthogonal “click chemistry” process is fast, selective, and well‐suited for biocompatible labeling applications.
Schematic illustrating the strain‐promoted inverse‐electron‐demand Diels–Alder (iEDDA) reaction between a tetrazine–dye conjugate and a trans‐cyclooctene (TCO)–modified biomolecule. The tetrazine–dye selectively and rapidly reacts with the TCO moiety on the biomolecule to form a stable linkage, labeling the nucleic acid with the dye. This bioorthogonal “click chemistry” process is fast, selective, and well‐suited for biocompatible labeling applications.