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AAT Bioquest

XFD635 PEG4 DBCO

Product key features

  • Ex/Em: 633/647 nm
  • Extinction Coefficient: 140,000 cm-1M-1
  • Reactive Group: DBCO
  • Copper-Free Bioorthogonal Labeling: Enables rapid and efficient azide conjugation via copper-free SPAAC
  • Robust Signal Performance: Maintains high intensity and pH independence (pH 4-11) with exceptional photostability
  • Hydrophilic PEG4 Spacer: Enhances solubility and minimizes steric hindrance for enhanced biocompatibility

Product description

XFD635, manufactured by AAT Bioquest, is a bright far red-fluorescent dye structurally identical to Alexa Fluor™ 635 (ThermoFisher). It is characterized by its intense brightness, high fluorescence quantum yield and photostability. The dye demonstrates excellent solubility in aqueous solutions and retains pH-independent fluorescence over a broad range (pH 4–11), ensuring consistent performance across diverse experimental conditions. Optimally excited by the 633 nm emission line of He-Ne lasers or the 635 nm diode laser, XFD635 is particularly well-suited for flow cytometry. Its robust and uniform labeling properties yield high signal intensity and reproducibility, making it an ideal choice for advanced fluorescence imaging, flow cytometry, and various fluorescence-based analytical techniques.

The DBCO derivative of XFD635 is a highly reactive cycloalkyne optimized for copper-free click chemistry (SPAAC, strain-promoted azide-alkyne cycloaddition). This derivative exhibits a significantly higher reaction rate with azides compared to other cyclooctynes and copper-catalyzed click reactions (CuAAC). Uniquely, DBCO does not react with tetrazines, allowing for its use in bioorthogonal reactions alongside trans-cyclooctenes and tetrazines. For applications where the presence of copper is problematic, XFD635 DBCO serves as an effective alternative to copper-dependent fluorescent alkynes.

Spectrum

Product family

NameExcitation (nm)Emission (nm)Extinction coefficient (cm -1 M -1)Quantum yieldCorrection Factor (260 nm)Correction Factor (280 nm)
XFD555 PEG4 DBCO5535681500000.110.080.08
XFD647 PEG4 DBCO6506712390000.3310.000.03
XFD680 PEG4 DBCO6817041840000.3610.000.05
XFD700 PEG4 DBCO6967191920000.2510.000.07
XFD750 PEG4 DBCO7527762400000.1210.000.04
XFD790 PEG4 DBCO782805260,000-0.090.08

References

View all 50 references: Citation Explorer
Clickable liposomes for on-demand reversal of antiplatelet drugs: Towards a safe management of bleeding risks associated with antithrombotic therapy.
Authors: Cheng, Xiaoyu and Wang, Chunling and Xu, Junchao and Huang, Yubiao and Chen, Zhuo and Zhong, Liyue and Du, Chong and Nie, Guangjun and Zhang, Yinlong
Journal: Journal of controlled release : official journal of the Controlled Release Society (2025): 1103-1113
Bioorthogonal reaction-mediated photosensitizer-peptide conjugate anchoring on cell membranes for enhanced photodynamic therapy.
Authors: Hu, Buwei and Ji, Chenlin and Zhou, Zhuohang and Xu, Xuehan and Wang, Luyi and Cao, Tingting and Cheng, Jianjun and Sun, Rui
Journal: Biomaterials science (2025)
Metabolic labeling and targeted modulation of adipocytes.
Authors: Wang, Yueji and Bo, Yang and Liu, Yusheng and Zhou, Jiadiao and Nguyen, Daniel and Baskaran, Dhyanesh and Liu, Yuan and Wang, Hua
Journal: Biomaterials science (2025): 434-445
A Spatially Distributed Microneedle System for Bioorthogonal T Cell-Guided Cancer Therapy.
Authors: Li, Lanya and Wang, Fei and Mo, Shushan and Deng, Junyao and Wang, Xueyi and Ai, Jiacong and Xiao, Yingxian and Zeng, Yan and Li, Qishan and Zhang, Yixin and Cai, Limin and Li, Zhenhua
Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany) (2025): e2416841
Conjugation of Multiple Proteins Onto the Surface of PLGA/Lipid Hybrid Nanoparticles.
Authors: Hu, He and Zhang, Chenming
Journal: Journal of biomedical materials research. Part A (2025): e37807
Page updated on April 15, 2025

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Catalog Number70086
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Physical properties

Solvent

DMSO

Spectral properties

Extinction coefficient (cm -1 M -1)

140,000

Excitation (nm)

633

Emission (nm)

647

Storage, safety and handling

H-phraseH303, H313, H333
Hazard symbolXN
Intended useResearch Use Only (RUO)
R-phraseR20, R21, R22

Storage

Freeze (< -15 °C); Minimize light exposure
UNSPSC12171501
Schematic illustrating the strain‐promoted azide–alkyne cycloaddition (SPAAC) between a dibenzocyclooctyne (DBCO)–dye conjugate and an azide‐modified biomolecule. The DBCO’s ring strain drives the copper‐free reaction with the azide to form a stable 1,2,3-triazole linkage, avoiding potential toxicity of copper catalysts. This bioorthogonal labeling strategy proceeds efficiently under mild conditions, making it especially valuable for live‐cell imaging, in vivo studies, and other sensitive bioconjugation applications.
Schematic illustrating the strain‐promoted azide–alkyne cycloaddition (SPAAC) between a dibenzocyclooctyne (DBCO)–dye conjugate and an azide‐modified biomolecule. The DBCO’s ring strain drives the copper‐free reaction with the azide to form a stable 1,2,3-triazole linkage, avoiding potential toxicity of copper catalysts. This bioorthogonal labeling strategy proceeds efficiently under mild conditions, making it especially valuable for live‐cell imaging, in vivo studies, and other sensitive bioconjugation applications.
Schematic illustrating the strain‐promoted azide–alkyne cycloaddition (SPAAC) between a dibenzocyclooctyne (DBCO)–dye conjugate and an azide‐modified biomolecule. The DBCO’s ring strain drives the copper‐free reaction with the azide to form a stable 1,2,3-triazole linkage, avoiding potential toxicity of copper catalysts. This bioorthogonal labeling strategy proceeds efficiently under mild conditions, making it especially valuable for live‐cell imaging, in vivo studies, and other sensitive bioconjugation applications.