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AAT Bioquest

Can I use beads for my immunoprecipitation assay?

Posted July 16, 2024


Answer

Yes, you can use beads for your immunoprecipitation (IP) assay. Agarose beads were traditionally used for IP assays but magnetic beads are now considered the better option for several reasons. 

  • Magnetic beads provide enhanced binding capacity because of their nonporous center. 
  • Because the antibody binds on the exposed outer surface of the beads, small amounts of antibody are enough to produce accurate results, ensuring more efficient antibody consumption. 
  • Magnetic beads do not need to be centrifuged, which minimizes the loss of bound materials. This produces more accurate results and also allows you to repeat your experiment with greater accuracy. 
  • Magnetic beads are fast, easy, and more convenient to use. This is because it is nonporous and there is no need to perform any incubation steps. 
  • Not having to perform any incubation, pre-clearing or centrifugation steps makes magnetic beads faster, easier and more convenient to use for IP assays. The entire procedure can be completed in 30 minutes with magnetic beads. 
  • Because you only need to use a small amount, magnetic beads are a more cost-effective option for IP assays.  
Additional resources

A Liquid Phase Affinity Capture Assay Using Magnetic Beads to Study Protein-Protein Interaction: The Poliovirus-Nanobody Example

Immunoprecipitation

ReadiPrep™ Goat anti-mouse IgG (H&L) Agarose