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DiO perchlorate [3,3-Dioctadecyloxacarbocyanine perchlorate] *CAS#: 34215-57-1*

DiI, DiO, DiD and DiR dyes are a family of lipophilic fluorescent stains for labeling membranes and other hydrophobic structures. The fluorescence of these environment-sensitive dyes is greatly enhanced when incorporated into membranes or bound to lipophilic biomolecules such as proteins although they are weakly fluorescent in water. They have high extinction coefficients, polarity-dependent fluorescence and short excited-state lifetimes. Once applied to cells, these dyes diffuse laterally within the cellular plasma membranes, resulting in even staining of the entire cell at their optimal concentrations. The distinct fluorescence colors of DiI (orange fluorescence), DiO (green fluorescence), DiD (red fluorescence) and DiR (deep red fluorescent) provide a convenient tool for multicolor imaging and flow cytometric analysis of live cells. DiO and DiI can be used with standard FITC and TRITC filters respectively. Among them DiD is well excited by the 633 nm He-Ne laser, and has much longer excitation and emission wavelengths than those of DiI, providing a valuable alternative for labeling cells and tissues that have significant intrinsic fluorescence. DiR might be useful for in vivo imaging or tracing due to the effective transmission of infrared light through cells and tissues and low level of autofluorescence in the infrared range.

Calculators

Common stock solution preparation

Table 1. Volume of DMSO needed to reconstitute specific mass of DiO perchlorate [3,3-Dioctadecyloxacarbocyanine perchlorate] *CAS#: 34215-57-1* to given concentration. Note that volume is only for preparing stock solution. Refer to sample experimental protocol for appropriate experimental/physiological buffers.

0.1 mg0.5 mg1 mg5 mg10 mg
1 mM113.417 µL567.086 µL1.134 mL5.671 mL11.342 mL
5 mM22.683 µL113.417 µL226.835 µL1.134 mL2.268 mL
10 mM11.342 µL56.709 µL113.417 µL567.086 µL1.134 mL

Molarity calculator

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Spectrum

Product family

NameExcitation (nm)Emission (nm)Extinction coefficient (cm -1 M -1)
DiD Perchlorate *UltraPure Grade*646663260000
DiI perchlorate [1,1-Dioctadecyl-3,3,3,3-tetramethylindocarbocyanine perchlorate] *CAS 41085-99-8*550564148000

Citations

View all 51 citations: Citation Explorer
The dynamin inhibitor, dynasore, prevents zoledronate-induced viability loss in human gingival fibroblasts by partially blocking zoledronate uptake and inhibiting endosomal acidification
Authors: Kirby, Jacob and Standfest, Makayla and Binkley, Jessica and Barnes, Charles and Brown, Evan and Cairncross, Tyler and Cartwright, Alex and Dadisman, Danielle and Mowat, Colten and Wilmot, Daniel and others,
Journal: Journal of Applied Oral Science (2024): e20240224
Lipopolysaccharide modification enhances the inhibitory effect of clodronate liposomes on hepatic fibrosis by depletion of macrophages and hepatic stellate cells
Authors: Zhang, Luyao and Tao, Min and Zhang, Hengyan and Zhang, Shichao and Hou, Xiaojuan and Zong, Chen and Sun, Gangqi and Feng, Shiyao and Yan, Haixin and Lu, Ying and others,
Journal: Chemico-Biological Interactions (2024): 111015
Exosomes Secreted by CSFV-Infected Cells Evade Neutralizing Antibody to Activate Innate Immune Responses and Establish Productive Infection in Recipient Cells
Authors: Bao, Xi and Zhuang, Tenhan and Xu, Yue and Chen, Li and Feng, Lei and Yao, Huochun
Journal: Veterinary Microbiology (2024): 110062
Bioactive cytomembrane@ poly (citrate-peptide)-miRNA365 nanoplatform with immune escape and homologous targeting for colon cancer therapy
Authors: Zhang, Long and Zhang, Wan and Peng, Hang and Shen, Tianli and Wang, Min and Luo, Meng and Qu, Xiaoyan and Qu, Fengyi and Liu, Wenguang and Lei, Bo and others,
Journal: Materials Today Bio (2022): 100294
Glomerular Signals Underlying Olfactory Navigation
Authors: Nouboussi Nkenfack, Nelly Merveille
Journal: (2020)

References

View all 92 references: Citation Explorer
Nox2, Ca2+, and protein kinase C play a role in angiotensin II-induced free radical production in nucleus tractus solitarius
Authors: Wang G, Anrather J, Glass MJ, Tarsitano MJ, Zhou P, Frys KA, Pickel VM, Iadecola C.
Journal: Hypertension (2006): 482
Confocal laser scanning microscopy using dialkylcarbocyanine dyes for cell tracing in hard and soft biomaterials
Authors: Heinrich L, Freyria AM, Melin M, Tourneur Y, Maksoud R, Bernengo JC, Hartmann DJ.
Journal: J Biomed Mater Res B Appl Biomater. (2006)
In vivo imaging and counting of rat retinal ganglion cells using a scanning laser ophthalmoscope
Authors: Higashide T, Kawaguchi I, Ohkubo S, Takeda H, Sugiyama K.
Journal: Invest Ophthalmol Vis Sci (2006): 2943
Functional neuroanatomy of the rhinophore of Aplysia punctata
Authors: Wertz A, Rossler W, Obermayer M, Bickmeyer U.
Journal: Front Zool (2006): 6
Use of lipophilic near-infrared dye in whole-body optical imaging of hematopoietic cell homing
Authors: Kalchenko V, Shivtiel S, Malina V, Lapid K, Haramati S, Lapidot T, Brill A, Harmelin A.
Journal: J Biomed Opt (2006): 50507
Page updated on November 23, 2024

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Physical properties

Molecular weight

881.7

Solvent

DMSO

Spectral properties

Excitation (nm)

483

Emission (nm)

501

Storage, safety and handling

H-phraseH303, H313, H333
Hazard symbolXN
Intended useResearch Use Only (RUO)
R-phraseR20, R21, R22

Storage

Freeze (< -15 °C); Minimize light exposure
UNSPSC12352200

CAS

34215-57-1