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Tide Quencher™ 5.1WS alkyne [TQ5.1WS alkyne]

Tide Quencher™ 5.1WS (TQ5.1WS) is a non-fluorescent molecule designed to efficiently quench the fluorescence of common NIR fluorophores such as Cy5, Cy5.5, Alexa Fluor® 647, Alexa Fluor® 647, iFluor® 647 and iFluor® 680. It is an improved version of TQ5 and QSY 21 and BHQ3). TQ5.1WS is designed to be a superior quencher with (a). much stronger absorption, and (b). much higher quenching efficiency. Tide Quencher™ 5.1WS Alkyne is an excellent building block for preparing TQ5.1WS-labeled probes from azido-modified oligonucleotides (including picolyl azide-modified oligonucleotides via the well-known click chemistry. It can be used in techniques such as polymerase chain reaction (PCR), real-time PCR, and DNA sequencing. In these applications, fluorescence signals are used to monitor the amplification or detection of specific DNA sequences. TQ5.1WS quenches the fluorescent signal until a specific event (like DNA strand separation or primer extension) occurs, leading to an increase in fluorescence that can be detected and quantified. Fluorescence resonance energy transfer (FRET)-based assays are widely used to detect and measure the presence of specific molecules in a sample. They involve the use of a fluorescent molecule (fluorophore) and a quencher molecule such as TQ5.1WS. The fluorophore emits light when excited by a specific wavelength of light, while the quencher molecule absorbs this emitted light, effectively "quenching" the fluorescence signal.

References

View all 40 references: Citation Explorer
Synthesis of Cy5-Labelled C5-Alkynyl-modified cytidine triphosphates via Sonogashira coupling for DNA labelling.
Authors: Kuznetsova, Viktoriya E and Shershov, Valeriy E and Guseinov, Teimur O and Miftakhov, Rinat A and Solyev, Pavel N and Novikov, Roman A and Levashova, Anna I and Zasedatelev, Alexander S and Lapa, Sergey A and Chudinov, Alexander V
Journal: Bioorganic chemistry (2023): 106315
DNA-Programmed Lipid Nanoreactors for Synthesis of Carbohydrate Mimetics by Fusion of Aqueous Sub-attoliter Compartments.
Authors: Tian, Xinwei and Risgaard, Nikolaj Alexander and Löffler, Philipp M G and Vogel, Stefan
Journal: Journal of the American Chemical Society (2023)
Multiscale imaging of therapeutic anti-PD-L1 antibody localization using molecularly defined imaging agents.
Authors: Hagemans, Iris M and Wierstra, Peter J and Steuten, Kas and Molkenboer-Kuenen, Janneke D M and van Dalen, Duco and Ter Beest, Martin and van der Schoot, Johan M S and Ilina, Olga and Gotthardt, Martin and Figdor, Carl G and Scheeren, Ferenc A and Heskamp, Sandra and Verdoes, Martijn
Journal: Journal of nanobiotechnology (2022): 64
Hybridization-Sensitive Fluorescent Probes for DNA and RNA by a Modular "Click" Approach.
Authors: Gebhard, Julian and Hirsch, Lara and Schwechheimer, Christian and Wagenknecht, Hans-Achim
Journal: Bioconjugate chemistry (2022): 1634-1642
Orthogonal Covalent Entrapment of Cargo into Biodegradable Polymeric Micelles via Native Chemical Ligation.
Authors: Hebels, Erik R and Bindt, Felix and Walther, Johanna and van Geijn, Michiel and Weterings, Jimmy and Hu, Qizhi and Colombo, Claudio and Liskamp, Rob and Rijcken, Cristianne and Hennink, Wim E and Vermonden, Tina
Journal: Biomacromolecules (2022)
Page updated on November 16, 2024

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Catalog Number2089
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Physical properties

Molecular weight

989.06

Solvent

DMSO

Storage, safety and handling

H-phraseH303, H313, H333
Hazard symbolXN
Intended useResearch Use Only (RUO)
R-phraseR20, R21, R22

Storage

Freeze (< -15 °C); Minimize light exposure
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