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Fluo-5F, AM *Cell permeant*

Fluo-5F is an analog of Fluo-4 with lower calcium-binding affinity (Kd = ~2.3 uM), making it suitable for detecting intracellular calcium levels in the range of 1 µM to 1 mM that would saturate the response of Fluo-4. Cells may be loaded with Fluo-5F AM ester by adding the dissolved indicator directly to dishes containing cultured cells. It is compatible with excitation at 488 nm by argon-ion laser sources, making Fluo-5F useful for confocal microscopy, flow cytometry, and microplate screening applications. It has excitation and emission wavelengths at 494 and 516 nm respectively. Upon calcium binding, its fluorescence intensity increases by >100 fold.

Example protocol

PREPARATION OF STOCK SOLUTIONS

Unless otherwise noted, all unused stock solutions should be divided into single-use aliquots and stored at -20 °C after preparation. Avoid repeated freeze-thaw cycles

Fluo-5F AM Stock Solution
  1. Prepare a 2 to 5 mM stock solution of Fluo-5F AM in high-quality, anhydrous DMSO.

PREPARATION OF WORKING SOLUTION

Fluo-5F AM Working Solution
  1. On the day of the experiment, either dissolve Fluo-5F AM in DMSO or thaw an aliquot of the indicator stock solution to room temperature.

  2. Prepare a 2 to 20 µM Fluo-5F AM working solution in a buffer of your choice (e.g., Hanks and Hepes buffer) with 0.04% Pluronic® F-127. For most cell lines, Fluo-5F AM at a final concentration of 4-5 μM is recommended. The exact concentration of indicators required for cell loading must be determined empirically.

    Note: The nonionic detergent Pluronic® F-127 is sometimes used to increase the aqueous solubility of Fluo-5F AM. A variety of Pluronic® F-127 solutions can be purchased from AAT Bioquest.

    Note: If your cells contain organic anion-transporters, probenecid (1-2 mM) may be added to the dye working solution (final in well concentration will be 0.5-1 mM) to reduce leakage of the de-esterified indicators. A variety of ReadiUse™ Probenecid products, including water-soluble, sodium salt, and stabilized solutions, can be purchased from AAT Bioquest.

SAMPLE EXPERIMENTAL PROTOCOL

Following is our recommended protocol for loading AM esters into live cells. This protocol only provides a guideline and should be modified according to your specific needs.

  1. Prepare cells in growth medium overnight.
  2. On the next day, add 1X Fluo-5F AM working solution to your cell plate.

    Note: If your compound(s) interfere with the serum, replace the growth medium with fresh HHBS buffer before dye-loading.

  3. Incubate the dye-loaded plate in a cell incubator at 37 °C for 30 to 60 minutes.

    Note: Incubating the dye for longer than 2 hours can improve signal intensities in certain cell lines.

  4. Replace the dye working solution with HHBS or buffer of your choice (containing an anion transporter inhibitor, such as 1 mM probenecid, if applicable) to remove any excess probes.
  5. Add the stimulant as desired and simultaneously measure fluorescence using either a fluorescence microscope equipped with a FITC filter set or a fluorescence plate reader containing a programmable liquid handling system such as an FDSS, FLIPR, or FlexStation, at 490/525 nm cutoff 515 nm.

Calculators

Common stock solution preparation

Table 1. Volume of DMSO needed to reconstitute specific mass of Fluo-5F, AM *Cell permeant* to given concentration. Note that volume is only for preparing stock solution. Refer to sample experimental protocol for appropriate experimental/physiological buffers.

0.1 mg0.5 mg1 mg5 mg10 mg
1 mM90.834 µL454.17 µL908.339 µL4.542 mL9.083 mL
5 mM18.167 µL90.834 µL181.668 µL908.339 µL1.817 mL
10 mM9.083 µL45.417 µL90.834 µL454.17 µL908.339 µL

Molarity calculator

Enter any two values (mass, volume, concentration) to calculate the third.

Mass (Calculate)Molecular weightVolume (Calculate)Concentration (Calculate)Moles
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Spectrum

Product family

NameExcitation (nm)Emission (nm)Extinction coefficient (cm -1 M -1)Quantum yield
Fluo-4 AM *Ultrapure Grade* *CAS 273221-67-3*495528820000.161
Fluo-3, AM *CAS 121714-22-5*50651586,00010.151
Fluo-3, AM *UltraPure grade* *CAS 121714-22-5*50651586,00010.151
Fluo-3, AM *Bulk package* *CAS 121714-22-5*50651586,00010.151
Fluo-3FF, AM *UltraPure grade* *Cell permeant*50651586,00010.151
Fluo-8®, AM495516234300.161
Fluo-8H™, AM495516234300.161
Fluo-8L™, AM495516234300.161
Fluo-8FF™, AM495516234300.161
Fluo-5N, AM *Cell permeant*494516--
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Citations

View all 13 citations: Citation Explorer
Biophysical Studies of Endocrine and Synaptic Release
Authors: Cheng, Jinbo
Journal: (2024)
Somatostatin modulation of initial fusion pores in Ca2+-triggered exocytosis from mouse chromaffin cells
Authors: Cheng, Jinbo and Jackson, Meyer B
Journal: The Journal of Physiology (2024)
Vitamin D is an endogenous partial agonist of the transient receptor potential vanilloid 1 channel
Authors: Long, Wentong and Fatehi, Mohammad and Soni, Shubham and Panigrahi, Rashmi and Philippaert, Koenraad and Yu, Yi and Kelly, Rees and Boonen, Brett and Barr, Amy and Golec, Dominic and others,
Journal: The Journal of Physiology (2020): 4321--4338
Calreticulin regulates TGF-β1-induced epithelial mesenchymal transition through modulating Smad signaling and calcium signaling
Authors: Wu, Yanjiao and Xu, Xiaoli and Ma, Lunkun and Yi, Qian and Sun, Weichao and Tang, Liling
Journal: The International Journal of Biochemistry & Cell Biology (2017)
Monosialoganglioside 1 may alleviate neurotoxicity induced by propofol combined with remifentanil in neural stem cells
Authors: Lu, Jiang and Yao, Xue-qin and Luo, Xin and Wang, Yu and Chung, Sookja Kim and Tang, He-xin and Cheung, Chi Wai and Wang, Xian-yu and Meng, Chen and Li, Qing and others, undefined
Journal: Neural Regeneration Research (2017): 945

References

View all 71 references: Citation Explorer
Direct detection of SERCA calcium transport and small-molecule inhibition in giant unilamellar vesicles
Authors: Bian T, Autry JM, Casemore D, Li J, Thomas DD, He G, Xing C.
Journal: Biochem Biophys Res Commun (2016): 206
Single cell and subcellular measurements of intracellular Ca(2)(+) concentration
Authors: McCarron JG, Olson ML, Chalmers S, Girkin JM.
Journal: Methods Mol Biol (2013): 239
Astrocyte calcium signals at Schaffer collateral to CA1 pyramidal cell synapses correlate with the number of activated synapses but not with synaptic strength
Authors: Honsek SD, Walz C, Kafitz KW, Rose CR.
Journal: Hippocampus (2012): 29
Preferential loading of bergmann glia with synthetic acetoxymethyl calcium dyes
Authors: Hoogl, undefined and TM, Kuhn B, Wang SS.
Journal: Cold Spring Harb Protoc (2011): 1228
Visualization and quantification of endoplasmic reticulum Ca2+ in renal cells using confocal microscopy and Fluo5F
Authors: Eaddy AC, Schnellmann RG.
Journal: Biochem Biophys Res Commun (2011): 424
Page updated on December 17, 2024

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Physical properties

Dissociation constant (Kd, nM)2300

Molecular weight

1100.91

Solvent

DMSO

Spectral properties

Excitation (nm)

494

Emission (nm)

516

Storage, safety and handling

H-phraseH303, H313, H333
Hazard symbolXN
Intended useResearch Use Only (RUO)
R-phraseR20, R21, R22

Storage

Freeze (< -15 °C); Minimize light exposure
UNSPSC12352200

Platform

Flow cytometer

Excitation488 nm laser
Emission530, 30 nm filter
Instrument specification(s)FITC channel

Fluorescence microscope

ExcitationFITC
EmissionFITC
Recommended plateBlack wall, clear bottom

Fluorescence microplate reader

Excitation490
Emission525
Cutoff515
Recommended plateBlack wall, clear bottom
Instrument specification(s)Bottom read mode, Programmable liquid handling