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6-JOE acid
6-JOE has similar absorption and emission spectra to those of rhodamine 6G, and its SE is predominantly used in automated DNA sequencing. It is also used to label nucleotides. 6-JOE acid is the most economic form to make a conjugate with amino-containing biomolecules.
Spectrum
Product family
| Name | Excitation (nm) | Emission (nm) | Extinction coefficient (cm -1 M -1) | Correction Factor (280 nm) |
| 6-JOE, SE [6-Carboxy-4',5'-dichloro-2',7'-dimethoxyfluorescein, succinimidyl ester] *CAS#: 113394-23-3* | 520 | 545 | 750001 | - |
| 6-OG488 acid [equivalent to Oregon Green® 488 carboxylic acid, 6-isomer] | 498 | 526 | 76000 | 0.12 |
| 6-JOE Phosphoramidite | 520 | 545 | 750001 | - |
| 6-ROXtra™ acid | 578 | 595 | - | - |
| 6-HEX acid | 533 | 559 | 73000 | 0.15 |
| 6-TET Acid | 521 | 542 | 73000 | 0.13 |
References
View all 4 references: Citation Explorer
Optical Biosensing System for the Detection of Survivin mRNA in Colorectal Cancer Cells Using a Graphene Oxide Carrier-Bound Oligonucleotide Molecular Beacon.
Authors: Ratajczak, Katarzyna and Krazinski, Bartlomiej E and Kowalczyk, Anna E and Dworakowska, Beata and Jakiela, Slawomir and Stobiecka, Magdalena
Journal: Nanomaterials (Basel, Switzerland) (2018)
Authors: Ratajczak, Katarzyna and Krazinski, Bartlomiej E and Kowalczyk, Anna E and Dworakowska, Beata and Jakiela, Slawomir and Stobiecka, Magdalena
Journal: Nanomaterials (Basel, Switzerland) (2018)
Hairpin-Hairpin Molecular Beacon Interactions for Detection of Survivin mRNA in Malignant SW480 Cells.
Authors: Ratajczak, Katarzyna and Krazinski, Bartlomiej E and Kowalczyk, Anna E and Dworakowska, Beata and Jakiela, Slawomir and Stobiecka, Magdalena
Journal: ACS applied materials & interfaces (2018): 17028-17039
Authors: Ratajczak, Katarzyna and Krazinski, Bartlomiej E and Kowalczyk, Anna E and Dworakowska, Beata and Jakiela, Slawomir and Stobiecka, Magdalena
Journal: ACS applied materials & interfaces (2018): 17028-17039
Molecular beacons with JOE dye: Influence of linker and 3' couple quencher.
Authors: Tsybulsky, Dmitry A and Kvach, Maksim V and Ryazantsev, Dmitry Y and Aparin, Ilya O and Stakheev, Alexander A and Prokhorenko, Igor A and Martynenko, Yury V and Gontarev, Sergey V and Formanovsky, Andrey A and Zatsepin, Timofei S and Shmanai, Vadim V and Korshun, Vladimir A and Zavriev, Sergey K
Journal: Molecular and cellular probes (2016): 285-290
Authors: Tsybulsky, Dmitry A and Kvach, Maksim V and Ryazantsev, Dmitry Y and Aparin, Ilya O and Stakheev, Alexander A and Prokhorenko, Igor A and Martynenko, Yury V and Gontarev, Sergey V and Formanovsky, Andrey A and Zatsepin, Timofei S and Shmanai, Vadim V and Korshun, Vladimir A and Zavriev, Sergey K
Journal: Molecular and cellular probes (2016): 285-290
Short PNA molecular beacons for real-time PCR allelic discrimination of single nucleotide polymorphisms.
Authors: Petersen, Kenneth and Vogel, Ulla and Rockenbauer, Eszter and Nielsen, Kirsten Vang and Kølvraa, Steen and Bolund, Lars and Nexø, Bjørn
Journal: Molecular and cellular probes (2004): 117-22
Authors: Petersen, Kenneth and Vogel, Ulla and Rockenbauer, Eszter and Nielsen, Kirsten Vang and Kølvraa, Steen and Bolund, Lars and Nexø, Bjørn
Journal: Molecular and cellular probes (2004): 117-22
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