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AAT Bioquest

How does Bridging PCR (BPCR) work?

Posted June 17, 2024


Answer

The principle for BPCR is described in the steps below.

  1. Shared Sequence Region: Two DNA templates have a central region of similar sequence  surrounded by regions of different sequences.
  2. Interruption: If one template has an interruption in its sequence, its primer can only extend up to that interruption point.
  3. Creation of New 3' End: Synthesis up to the interruption creates a new 3' end at the interruption site. 
  4. Annealing and Primer Extension: In the next PCR round, this new 3' end anneals to the second template in the shared sequence region. 
  5. Synthesis on Second Template: Primer extension proceeds to the end of the second template, creating a molecule with both primer binding sites from different templates.
  6. Exponential Amplification: This new molecule, now containing both primer binding sites, undergoes exponential amplification in subsequent PCR rounds.
Additional resources

Signal and noise in bridging PCR

Bridge PCR

Helixyte™ Green *20X Aqueous PCR Solution*