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AAT Bioquest

XFD405 PEG4 DBCO

Product key features

  • Ex/Em: 401/421 nm
  • Extinction coefficient: 35,000 cm-1M-1
  • Reactive Group: DBCO
  • Copper-Free Bioorthogonal Labeling: Enables rapid and efficient azide conjugation via copper-free SPAAC
  • Stable Fluorescence: Resists photobleaching, pH-insensitive from pH 4 to 10, and minimal quenching when conjugated to proteins
  • Advanced PEG4 Spacer: Enhances solubility and minimizes steric hindrance for improved biocompatibility

Product description

XFD405, manufactured by AAT Bioquest, is a blue-fluorescent dye that is structurally identical to Alexa Fluor™ 405 (ThermoFisher). The incorporation of a PEG4 linker enhances its aqueous ability, and it is effectively excited by the 407 nm krypton laser line or the 408 nm violet laser diode, making it suitable for a range of fluorescence-based techniques. XFD405 is pH-insensitive across a wide range (pH 4 - 10) and exhibits minimal quenching when conjugated to proteins, ensuring consistent fluorescence signals in live-cell imaging. With an excitation maximum at 401 nm and emission at 422 nm, XFD405 is well-suited for multicolor flow cytometry and super-resolution microscopy (STORM), providing reliable performance in applications requiring distinct spectral separation and photostability.

The DBCO derivative of XFD405 is a highly reactive cycloalkyne optimized for copper-free click chemistry (SPAAC, strain-promoted azide-alkyne cycloaddition). This derivative exhibits a significantly higher reaction rate with azides compared to other cyclooctynes and copper-catalyzed click reactions (CuAAC). Uniquely, DBCO does not react with tetrazines, allowing for its use in bioorthogonal reactions alongside trans-cyclooctenes and tetrazines. For applications where the presence of copper is problematic, XFD405 DBCO serves as an effective alternative to copper-dependent fluorescent alkynes.

Spectrum

Product family

NameExcitation (nm)Emission (nm)Extinction coefficient (cm -1 M -1)Quantum yieldCorrection Factor (260 nm)Correction Factor (280 nm)
XFD488 PEG4 DBCO499520710000.9210.300.11
XFD350 PEG4 DBCO34344119000-0.250.19
XFD430 PEG4 DBCO43254015,000--0.28
XFD514 PEG4 DBCO51854380000-0.310.18
XFD546 PEG4 DBCO5615721120000.7910.210.12
XFD532 PEG4 DBCO534553810000.6110.240.09
XFD568 PEG4 DBCO579603913000.6910.450.46
XFD594 PEG4 DBCO590618900000.6610.430.56
Page updated on December 2, 2024

Ordering information

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Unit size
Catalog Number70015
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Additional ordering information

Telephone1-800-990-8053
Fax1-800-609-2943
Emailsales@aatbio.com
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Physical properties

Molecular weight

1438.82

Solvent

DMSO

Spectral properties

Correction Factor (260 nm)

0.23

Correction Factor (280 nm)

0.70

Extinction coefficient (cm -1 M -1)

35,000

Excitation (nm)

401

Emission (nm)

421

Storage, safety and handling

Certificate of OriginDownload PDF
H-phraseH303, H313, H333
Hazard symbolXN
Intended useResearch Use Only (RUO)
R-phraseR20, R21, R22

Storage

Freeze (< -15 °C); Minimize light exposure
UNSPSC12352200