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ATTO 488 alkyne

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Physical properties
Molecular weight626.66
SolventDMSO
Spectral properties
Correction Factor (260 nm)0.25
Correction Factor (280 nm)0.10
Extinction coefficient (cm -1 M -1)90000
Excitation (nm)499
Emission (nm)520
Quantum yield0.80
Storage, safety and handling
H-phraseH303, H313, H333
Hazard symbolXN
Intended useResearch Use Only (RUO)
R-phraseR20, R21, R22
StorageFreeze (< -15 °C); Minimize light exposure
UNSPSC12171501

OverviewpdfSDSpdfProtocol


Molecular weight
626.66
Correction Factor (260 nm)
0.25
Correction Factor (280 nm)
0.10
Extinction coefficient (cm -1 M -1)
90000
Excitation (nm)
499
Emission (nm)
520
Quantum yield
0.80
ATTO 488 is a rhodamine-based fluorescent probe with excellent aqueous solubility and favorable spectral properties. It exhibits strong absorption, high fluorescence quantum yield, and notable photostability, making it optimal for fluorescence imaging applications. ATTO 488 is particularly effective in single-molecule detection and high-resolution microscopy techniques such as PALM, dSTORM, and STED. It is also suitable for flow cytometry (FACS), fluorescence in situ hybridization (FISH), and various other biological assays. The alkyne derivative of ATTO 488 can participate in copper(I)-catalyzed azide-alkyne cycloaddition (CuAAC) with terminal azides, forming a stable triazole linker. Additionally, ATTO 488 alkyne can function as a bio-orthogonal or biologically unique hapten for applications involving signal amplification.

Calculators


Common stock solution preparation

Table 1. Volume of DMSO needed to reconstitute specific mass of ATTO 488 alkyne to given concentration. Note that volume is only for preparing stock solution. Refer to sample experimental protocol for appropriate experimental/physiological buffers.

0.1 mg0.5 mg1 mg5 mg10 mg
1 mM159.576 µL797.881 µL1.596 mL7.979 mL15.958 mL
5 mM31.915 µL159.576 µL319.152 µL1.596 mL3.192 mL
10 mM15.958 µL79.788 µL159.576 µL797.881 µL1.596 mL

Molarity calculator

Enter any two values (mass, volume, concentration) to calculate the third.

Mass (Calculate)Molecular weightVolume (Calculate)Concentration (Calculate)Moles
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Spectrum


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spectrum

Spectral properties

Correction Factor (260 nm)0.25
Correction Factor (280 nm)0.10
Extinction coefficient (cm -1 M -1)90000
Excitation (nm)499
Emission (nm)520
Quantum yield0.80

Product Family


NameExcitation (nm)Emission (nm)Extinction coefficient (cm -1 M -1)Quantum yieldCorrection Factor (260 nm)Correction Factor (280 nm)
iFluor® 488 alkyne4915167500010.910.210.11
ATTO 488 DBCO499520900000.800.250.10

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References


View all 7 references: Citation Explorer
The new live imagers MitoMM1/2 for mitochondrial visualization.
Authors: Maeda, Miwa and Suzuki, Mayu and Takashima, Shigeo and Sasaki, Tsutomu and Oh-Hashi, Kentaro and Takemori, Hiroshi
Journal: Biochemical and biophysical research communications (2021): 50-54
DNA-templated control of chirality and efficient energy transport in supramolecular DNA architectures with aggregation-induced emission.
Authors: Ucar, Hülya and Wagenknecht, Hans-Achim
Journal: Chemical science (2021): 10048-10053
Endoplasmic reticulum phospholipid scramblase activity revealed after protein reconstitution into giant unilamellar vesicles containing a photostable lipid reporter.
Authors: Mathiassen, Patricia P M and Menon, Anant K and Pomorski, Thomas Günther
Journal: Scientific reports (2021): 14364
Importance of probe design for bioanalysis of oligonucleotides using hybridization-based LC-fluorescence assays.
Authors: Ji, Yuhuan and Liu, Yijiang and Xia, Wanhong and Behling, Alexander and Meng, Min and Bennett, Patrick and Wang, Laixin
Journal: Bioanalysis (2019): 1917-1925
The effect of local dynamics of Atto 390-labeled lysozyme on fluorescence anisotropy modeling.
Authors: Babcock, Jeremiah J and Brancaleon, Lorenzo
Journal: Biopolymers (2015): 285-95
Binding assay for low molecular weight analytes based on reflectometry of absorbing molecules in porous substrates.
Authors: Stephan, Milena and Kramer, Corinna and Steinem, Claudia and Janshoff, Andreas
Journal: The Analyst (2014): 1987-92
Fluorescently labeled substrates for monitoring α1,3-fucosyltransferase IX activity.
Authors: Lunau, Nathalie and Seelhorst, Katrin and Kahl, Stefanie and Tscherch, Kathrin and Stacke, Christina and Rohn, Sascha and Thiem, Joachim and Hahn, Ulrich and Meier, Chris
Journal: Chemistry (Weinheim an der Bergstrasse, Germany) (2013): 17379-90